C-BER - Book Chapters

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    Medical information extraction in European Portuguese
    ( 2013) Ferreira,L ; Teixeira,A ; João Paulo Cunha
    The electronic storage of medical patient data is becoming a daily experience in most of the practices and hospitals worldwide. However, much of the available data is in free text form, a convenient way of expressing concepts and events but especially challenging if one wants to perform automatic searches, summarization, or statistical analyses. Information Extraction can relieve some of these problems by offering a semantically informed interpretation and abstraction of the texts. MedInX, the Medical Information eXtraction system presented in this chapter is designed to process textual clinical discharge records in order to perform automatic and accurate mapping of free text reports onto a structured representation. MedInX components are based on Natural Language Processing principles and provide several mechanisms to read, process, and utilize external resources, such as terminologies and ontologies. MedInX current practical applications include automatic code assignment and an audit system capable of systematically analyze the content and completeness of the clinical reports. Recent evaluation efforts on a set of authentic patient discharge letters indicate that the system performs with 95% precision and recall. © 2013, IGI Global.
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    Segmentation of the Vascular Network of the Retina
    ( 2014) Ana Maria Mendonça ; Dashtbozorg,B ; Aurélio Campilho
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    Segmentation of carotid ultrasound images
    ( 2014) Rocha,R ; Jorge Silva ; Aurélio Campilho
    This chapter surveys methodologies for the segmentation of carotid ultrasound images and describes a method for the semiautomatic detection of the lumen-intima and the media-adventitia interfaces of the near and far common carotid wall. The approach is based on feature extraction, fitting of cubic splines, dynamic programming, smooth intensity thresholding surfaces, and geometric snakes. A set of 47 B-mode images of the common carotid were used to assess the performance of the method. The detection errors are similar to the ones observed in manual segmentations for 95% of the far wall interfaces and 73% of the near wall interfaces. © 2014 Springer Science+Business Media, LLC. All rights are reserved.
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    Analysis and quantification of upper-limb movement in motor rehabilitation after stroke
    ( 2017) Silva,RM ; Sousa,E ; Fonseca,P ; Pinheiro,AR ; Silva,C ; Miguel Velhote Correia ; Mouta,S
    It is extremely difficult to reduce the relations between the several body parts that perform human motion to a simplified set of features. Therefore, the study of the upper-limb functionality is still in development, partly due to the wider range of actions and strategies for motor execution. This, in turn, leads to inconsistent upper-limb movement parameterization. We propose a methodology to assess and quantify the upper-limb motor execution. Extracting key variables from different sources, we intended to quantify healthy upper-limb movement and use these parameters to quantify motor execution during rehabilitation after stroke. In order to do so, we designed an experimental setup defining a workspace for the execution of the action recording kinematic data. Results reveal an effect of object and instruction on the timing of upper-limb movement, indicating that the spatiotemporal analysis of kinematic data can be used as a quantification parameter for motor rehabilitation stages and methods. © Springer International Publishing AG 2017.